Protein–RNA interactions for Protein: Q8BRJ4

Ppp1r3e, Protein phosphatase 1 regulatory subunit 3E, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r3eQ8BRJ4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Gm6257-201ENSMUST00000163864 910 ntBASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 CT009713.7-201ENSMUST00000224689 571 ntBASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Ppp1r3eQ8BRJ4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Gm10013-201ENSMUST00000106074 672 ntBASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ppp1r3eQ8BRJ4 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ppp1r3eQ8BRJ4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Ppp1r3eQ8BRJ4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ppp1r3eQ8BRJ4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms