Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Gm18101-201ENSMUST00000215769 548 ntBASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Chmp2bQ8BJF9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Gm11355-201ENSMUST00000121120 306 ntBASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp2bQ8BJF9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp2bQ8BJF9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Chmp2bQ8BJF9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp2bQ8BJF9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
Chmp2bQ8BJF9 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Chmp2bQ8BJF9 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Chmp2bQ8BJF9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Chmp2bQ8BJF9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms