Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh20Q8BIZ0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh20Q8BIZ0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Mir3081-201ENSMUST00000175305 84 ntBASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Gm18669-201ENSMUST00000216049 778 ntBASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdh20Q8BIZ0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdh20Q8BIZ0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms