Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Depdc1bQ8BH88 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Rprl3-201ENSMUST00000157400 290 ntBASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Depdc1bQ8BH88 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Depdc1bQ8BH88 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Gm5864-201ENSMUST00000202263 970 ntBASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Depdc1bQ8BH88 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Depdc1bQ8BH88 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Depdc1bQ8BH88 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Depdc1bQ8BH88 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Depdc1bQ8BH88 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Depdc1bQ8BH88 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
Depdc1bQ8BH88 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Depdc1bQ8BH88 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms