Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.39■□□□□ 0.21
Srrm3Q80WV7 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.38■□□□□ 0.21
Srrm3Q80WV7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.38■□□□□ 0.21
Srrm3Q80WV7 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Srrm3Q80WV7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Gm13186-201ENSMUST00000118031 316 ntBASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Srrm3Q80WV7 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Gm7638-201ENSMUST00000121348 967 ntBASIC16.35■□□□□ 0.21
Srrm3Q80WV7 AW822252-206ENSMUST00000208904 237 ntBASIC16.35■□□□□ 0.21
Srrm3Q80WV7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Srrm3Q80WV7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms