Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Sh3d21Q7TSG5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Gm6257-201ENSMUST00000163864 910 ntBASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sh3d21Q7TSG5 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh3d21Q7TSG5 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
Sh3d21Q7TSG5 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.21■□□□□ 0.34
Sh3d21Q7TSG5 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Gm12895-201ENSMUST00000122214 226 ntBASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Sh3d21Q7TSG5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Gm25745-201ENSMUST00000174945 133 ntBASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Dancr-204ENSMUST00000132389 2347 ntBASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Sh3d21Q7TSG5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Prob1-201ENSMUST00000097619 3021 ntBASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sh3d21Q7TSG5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.17■□□□□ 0.34
Sh3d21Q7TSG5 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms