Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Gm8318-201ENSMUST00000182954 872 ntBASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ddx55Q6ZPL9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Gm25287-201ENSMUST00000103846 110 ntBASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Gm22918-201ENSMUST00000103855 110 ntBASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ddx55Q6ZPL9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Gm27430-201ENSMUST00000184585 107 ntBASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Gm44333-201ENSMUST00000197168 107 ntBASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ddx55Q6ZPL9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Gm24158-201ENSMUST00000175263 71 ntBASIC17.78■□□□□ 0.44
Ddx55Q6ZPL9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms