Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Snrnp40Q6PE01 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Snrnp40Q6PE01 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Snrnp40Q6PE01 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Snrnp40Q6PE01 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Mir449b-201ENSMUST00000104833 80 ntBASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Rpph1-201ENSMUST00000175096 319 ntBASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Snrnp40Q6PE01 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Snrnp40Q6PE01 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.75□□□□□ -0.21
Snrnp40Q6PE01 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Gm9385-201ENSMUST00000117563 472 ntBASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Gm7774-201ENSMUST00000200064 533 ntBASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Snrnp40Q6PE01 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms