Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Chd4Q6PDQ2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Gm29541-201ENSMUST00000191351 678 ntBASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Gm37277-201ENSMUST00000194052 1111 ntBASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Chd4Q6PDQ2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd4Q6PDQ2 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd4Q6PDQ2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd4Q6PDQ2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd4Q6PDQ2 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC20.33■□□□□ 0.84
Chd4Q6PDQ2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.33■□□□□ 0.84
Chd4Q6PDQ2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC20.33■□□□□ 0.84
Chd4Q6PDQ2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Chd4Q6PDQ2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
Chd4Q6PDQ2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Chd4Q6PDQ2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Gm2810-201ENSMUST00000118681 990 ntBASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Gm25287-201ENSMUST00000103846 110 ntBASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Gm22918-201ENSMUST00000103855 110 ntBASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Chd4Q6PDQ2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 AC153526.5-201ENSMUST00000218661 2147 ntBASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Chd4Q6PDQ2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 AC124732.2-201ENSMUST00000221977 316 ntBASIC20.29■□□□□ 0.84
Chd4Q6PDQ2 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms