Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Abcf1Q6P542 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Abcf1Q6P542 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcf1Q6P542 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcf1Q6P542 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcf1Q6P542 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcf1Q6P542 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
Abcf1Q6P542 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Abcf1Q6P542 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Abcf1Q6P542 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Gm14859-201ENSMUST00000117752 357 ntBASIC17.62■□□□□ 0.41
Abcf1Q6P542 Gm6623-201ENSMUST00000173570 544 ntBASIC17.62■□□□□ 0.41
Abcf1Q6P542 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.62■□□□□ 0.41
Abcf1Q6P542 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Abcf1Q6P542 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.61■□□□□ 0.41
Abcf1Q6P542 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.61■□□□□ 0.41
Abcf1Q6P542 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Gm18421-201ENSMUST00000204122 625 ntBASIC17.61■□□□□ 0.41
Abcf1Q6P542 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Abcf1Q6P542 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Abcf1Q6P542 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Gm29518-201ENSMUST00000190858 372 ntBASIC17.6■□□□□ 0.41
Abcf1Q6P542 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Abcf1Q6P542 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Abcf1Q6P542 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms