Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rtl3Q6P1Y1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rtl3Q6P1Y1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Gm13418-201ENSMUST00000119097 944 ntBASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Gm1401-201ENSMUST00000122048 772 ntBASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Gm37935-201ENSMUST00000192012 982 ntBASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rtl3Q6P1Y1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rtl3Q6P1Y1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rtl3Q6P1Y1 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rtl3Q6P1Y1 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rtl3Q6P1Y1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rtl3Q6P1Y1 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rtl3Q6P1Y1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Mir5131-201ENSMUST00000175426 93 ntBASIC16.19■□□□□ 0.18
Rtl3Q6P1Y1 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms