Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Krt39Q6IFX4 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Krt39Q6IFX4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Krt39Q6IFX4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Mir6404-201ENSMUST00000183699 94 ntBASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Sybu-209ENSMUST00000228639 4113 ntBASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Krt39Q6IFX4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Mir770-201ENSMUST00000103252 94 ntBASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.38■□□□□ 0.37
Krt39Q6IFX4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Krt39Q6IFX4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Gm23634-201ENSMUST00000175071 91 ntBASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Krt39Q6IFX4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms