Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scube3Q66PY1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.47■□□□□ 0.23
Scube3Q66PY1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scube3Q66PY1 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.47■□□□□ 0.23
Scube3Q66PY1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scube3Q66PY1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.46■□□□□ 0.23
Scube3Q66PY1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.46■□□□□ 0.23
Scube3Q66PY1 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.46■□□□□ 0.23
Scube3Q66PY1 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scube3Q66PY1 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Scube3Q66PY1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Scube3Q66PY1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Gm8344-201ENSMUST00000119813 856 ntBASIC16.45■□□□□ 0.22
Scube3Q66PY1 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Gm27646-201ENSMUST00000183989 110 ntBASIC16.45■□□□□ 0.22
Scube3Q66PY1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.45■□□□□ 0.22
Scube3Q66PY1 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Gm18195-201ENSMUST00000207604 706 ntBASIC16.45■□□□□ 0.22
Scube3Q66PY1 Gm10060-201ENSMUST00000212002 111 ntBASIC16.45■□□□□ 0.22
Scube3Q66PY1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.45■□□□□ 0.22
Scube3Q66PY1 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scube3Q66PY1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scube3Q66PY1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms