Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col11a2Q64739 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Col11a2Q64739 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Col11a2Q64739 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.83■□□□□ 0.61
Col11a2Q64739 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Col11a2Q64739 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col11a2Q64739 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col11a2Q64739 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Col11a2Q64739 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col11a2Q64739 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Col11a2Q64739 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.83■□□□□ 0.61
Col11a2Q64739 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.83■□□□□ 0.61
Col11a2Q64739 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Col11a2Q64739 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Col11a2Q64739 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.83■□□□□ 0.6
Col11a2Q64739 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.83■□□□□ 0.6
Col11a2Q64739 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.83■□□□□ 0.6
Col11a2Q64739 Gm44344-201ENSMUST00000200287 129 ntBASIC18.83■□□□□ 0.6
Col11a2Q64739 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Col11a2Q64739 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Col11a2Q64739 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.83■□□□□ 0.6
Col11a2Q64739 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.82■□□□□ 0.6
Col11a2Q64739 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Col11a2Q64739 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Col11a2Q64739 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Col11a2Q64739 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.82■□□□□ 0.6
Col11a2Q64739 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.82■□□□□ 0.6
Col11a2Q64739 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.82■□□□□ 0.6
Col11a2Q64739 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.82■□□□□ 0.6
Col11a2Q64739 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.82■□□□□ 0.6
Col11a2Q64739 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Col11a2Q64739 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Col11a2Q64739 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Col11a2Q64739 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Col11a2Q64739 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Gm38225-201ENSMUST00000194001 393 ntBASIC18.81■□□□□ 0.6
Col11a2Q64739 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Col11a2Q64739 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Col11a2Q64739 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Col11a2Q64739 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Col11a2Q64739 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Col11a2Q64739 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Col11a2Q64739 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a2Q64739 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a2Q64739 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col11a2Q64739 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a2Q64739 Gm18049-201ENSMUST00000208909 581 ntBASIC18.8■□□□□ 0.6
Col11a2Q64739 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.8■□□□□ 0.6
Col11a2Q64739 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Col11a2Q64739 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Col11a2Q64739 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.8■□□□□ 0.6
Col11a2Q64739 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC18.8■□□□□ 0.6
Col11a2Q64739 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a2Q64739 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a2Q64739 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a2Q64739 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a2Q64739 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a2Q64739 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Col11a2Q64739 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.8■□□□□ 0.6
Col11a2Q64739 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Col11a2Q64739 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Col11a2Q64739 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms