Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col7a1Q63870 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.86□□□□□ -0.35
Col7a1Q63870 Gm5953-201ENSMUST00000220644 2616 ntBASIC12.86□□□□□ -0.35
Col7a1Q63870 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col7a1Q63870 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.86□□□□□ -0.35
Col7a1Q63870 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Gm11543-201ENSMUST00000120758 370 ntBASIC12.85□□□□□ -0.35
Col7a1Q63870 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.85□□□□□ -0.35
Col7a1Q63870 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.85□□□□□ -0.35
Col7a1Q63870 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.85□□□□□ -0.35
Col7a1Q63870 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.85□□□□□ -0.35
Col7a1Q63870 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.85□□□□□ -0.35
Col7a1Q63870 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.85□□□□□ -0.35
Col7a1Q63870 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col7a1Q63870 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col7a1Q63870 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col7a1Q63870 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Col7a1Q63870 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.85□□□□□ -0.35
Col7a1Q63870 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col7a1Q63870 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col7a1Q63870 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.84□□□□□ -0.35
Col7a1Q63870 Snora78-201ENSMUST00000158630 128 ntBASIC12.84□□□□□ -0.35
Col7a1Q63870 Gm27920-201ENSMUST00000183953 96 ntBASIC12.84□□□□□ -0.35
Col7a1Q63870 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.84□□□□□ -0.35
Col7a1Q63870 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.84□□□□□ -0.35
Col7a1Q63870 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.84□□□□□ -0.35
Col7a1Q63870 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.84□□□□□ -0.35
Col7a1Q63870 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.84□□□□□ -0.35
Col7a1Q63870 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC12.84□□□□□ -0.35
Col7a1Q63870 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.84□□□□□ -0.35
Col7a1Q63870 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC12.84□□□□□ -0.35
Col7a1Q63870 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.84□□□□□ -0.35
Col7a1Q63870 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Col7a1Q63870 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col7a1Q63870 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.83□□□□□ -0.36
Col7a1Q63870 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC12.83□□□□□ -0.36
Col7a1Q63870 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col7a1Q63870 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Col7a1Q63870 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.83□□□□□ -0.36
Col7a1Q63870 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC12.83□□□□□ -0.36
Col7a1Q63870 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Col7a1Q63870 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC12.83□□□□□ -0.36
Col7a1Q63870 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.83□□□□□ -0.36
Col7a1Q63870 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.83□□□□□ -0.36
Col7a1Q63870 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.83□□□□□ -0.36
Col7a1Q63870 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Col7a1Q63870 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col7a1Q63870 Gm10499-201ENSMUST00000174094 934 ntBASIC12.82□□□□□ -0.36
Col7a1Q63870 Gm37917-201ENSMUST00000194711 392 ntBASIC12.82□□□□□ -0.36
Col7a1Q63870 Gm37466-201ENSMUST00000195692 652 ntBASIC12.82□□□□□ -0.36
Col7a1Q63870 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.82□□□□□ -0.36
Col7a1Q63870 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col7a1Q63870 Fam105a-203ENSMUST00000226170 3043 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms