Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.42■□□□□ 0.38
Col11a1Q61245 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col11a1Q61245 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col11a1Q61245 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Col11a1Q61245 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Col11a1Q61245 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.42■□□□□ 0.38
Col11a1Q61245 Gm7901-201ENSMUST00000120430 1597 ntBASIC17.42■□□□□ 0.38
Col11a1Q61245 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Col11a1Q61245 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col11a1Q61245 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col11a1Q61245 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Col11a1Q61245 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.42■□□□□ 0.38
Col11a1Q61245 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Col11a1Q61245 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col11a1Q61245 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC17.42■□□□□ 0.38
Col11a1Q61245 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.42■□□□□ 0.38
Col11a1Q61245 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Col11a1Q61245 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.41■□□□□ 0.38
Col11a1Q61245 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col11a1Q61245 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.41■□□□□ 0.38
Col11a1Q61245 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.41■□□□□ 0.38
Col11a1Q61245 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.41■□□□□ 0.38
Col11a1Q61245 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.41■□□□□ 0.38
Col11a1Q61245 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Col11a1Q61245 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col11a1Q61245 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Col11a1Q61245 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col11a1Q61245 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col11a1Q61245 Gm16026-204ENSMUST00000162652 683 ntBASIC17.41■□□□□ 0.38
Col11a1Q61245 Gm27533-201ENSMUST00000183800 152 ntBASIC17.41■□□□□ 0.38
Col11a1Q61245 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Col11a1Q61245 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col11a1Q61245 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col11a1Q61245 Syt7-205ENSMUST00000224135 1557 ntBASIC17.41■□□□□ 0.38
Col11a1Q61245 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col11a1Q61245 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Col11a1Q61245 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Col11a1Q61245 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.4■□□□□ 0.38
Col11a1Q61245 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Col11a1Q61245 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Col11a1Q61245 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
Col11a1Q61245 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Gm38225-201ENSMUST00000194001 393 ntBASIC17.4■□□□□ 0.38
Col11a1Q61245 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.4■□□□□ 0.38
Col11a1Q61245 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Col11a1Q61245 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Col11a1Q61245 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Col11a1Q61245 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.39■□□□□ 0.37
Col11a1Q61245 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.39■□□□□ 0.37
Col11a1Q61245 Gm15483-201ENSMUST00000120338 456 ntBASIC17.39■□□□□ 0.37
Col11a1Q61245 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Col11a1Q61245 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col11a1Q61245 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.39■□□□□ 0.37
Col11a1Q61245 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.39■□□□□ 0.37
Col11a1Q61245 Gm15222-202ENSMUST00000228667 1726 ntBASIC17.39■□□□□ 0.37
Col11a1Q61245 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col11a1Q61245 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.38■□□□□ 0.37
Col11a1Q61245 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 AC124751.1-201ENSMUST00000222716 1408 ntBASIC17.38■□□□□ 0.37
Col11a1Q61245 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.38■□□□□ 0.37
Col11a1Q61245 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.38■□□□□ 0.37
Col11a1Q61245 Gm44344-201ENSMUST00000200287 129 ntBASIC17.38■□□□□ 0.37
Col11a1Q61245 Gm18049-201ENSMUST00000208909 581 ntBASIC17.38■□□□□ 0.37
Col11a1Q61245 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col11a1Q61245 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.38■□□□□ 0.37
Col11a1Q61245 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col11a1Q61245 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col11a1Q61245 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC17.37■□□□□ 0.37
Col11a1Q61245 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.37■□□□□ 0.37
Col11a1Q61245 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms