Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav7d-4Q5R1H9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Il3ra-202ENSMUST00000223589 738 ntBASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav7d-4Q5R1H9 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Gm11839-201ENSMUST00000120647 1953 ntBASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Gm11249-201ENSMUST00000117071 859 ntBASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Gm12134-201ENSMUST00000122109 520 ntBASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Gm32996-201ENSMUST00000199828 1447 ntBASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav7d-4Q5R1H9 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 AC122769.4-201ENSMUST00000228166 901 ntBASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav7d-4Q5R1H9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms