Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6-3Q5R1E6 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6-3Q5R1E6 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6-3Q5R1E6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Gm11950-201ENSMUST00000121615 838 ntBASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Gm45328-201ENSMUST00000210942 917 ntBASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav6-3Q5R1E6 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms