Protein–RNA interactions for Protein: Q3UHD6

Snx27, Sorting nexin-27, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx27Q3UHD6 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.94■□□□□ 0.3
Snx27Q3UHD6 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Gm10175-201ENSMUST00000086013 645 ntBASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Snx27Q3UHD6 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Snx27Q3UHD6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Mir3113-201ENSMUST00000175478 76 ntBASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Snx27Q3UHD6 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.91■□□□□ 0.3
Snx27Q3UHD6 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Snx27Q3UHD6 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms