Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Gm27892-201ENSMUST00000185017 106 ntBASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Spg11Q3UHA3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Gm13392-201ENSMUST00000117708 150 ntBASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Gm5303-201ENSMUST00000117943 1252 ntBASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Gm19164-201ENSMUST00000210667 640 ntBASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Spg11Q3UHA3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Gm13226-201ENSMUST00000117838 404 ntBASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Gm38241-201ENSMUST00000192641 898 ntBASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Gm38225-201ENSMUST00000194001 393 ntBASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Spg11Q3UHA3 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Gm20445-201ENSMUST00000061905 565 ntBASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Gm15236-201ENSMUST00000117309 379 ntBASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Spg11Q3UHA3 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Spg11Q3UHA3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms