Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm27704-201ENSMUST00000185094 107 ntBASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Brf2Q3UAW9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Gm33142-201ENSMUST00000193913 867 ntBASIC14.8□□□□□ -0.04
Brf2Q3UAW9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Brf2Q3UAW9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Gm7284-201ENSMUST00000131667 944 ntBASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Gm44454-201ENSMUST00000198541 138 ntBASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Brf2Q3UAW9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Brf2Q3UAW9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms