Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Apoa1Q00623 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.89□□□□□ -0.03
Apoa1Q00623 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.89□□□□□ -0.03
Apoa1Q00623 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Apoa1Q00623 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Apoa1Q00623 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.89□□□□□ -0.03
Apoa1Q00623 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Apoa1Q00623 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Apoa1Q00623 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Apoa1Q00623 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Apoa1Q00623 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.88□□□□□ -0.03
Apoa1Q00623 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.88□□□□□ -0.03
Apoa1Q00623 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Apoa1Q00623 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Apoa1Q00623 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Apoa1Q00623 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.87□□□□□ -0.03
Apoa1Q00623 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.87□□□□□ -0.03
Apoa1Q00623 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.87□□□□□ -0.03
Apoa1Q00623 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.87□□□□□ -0.03
Apoa1Q00623 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.87□□□□□ -0.03
Apoa1Q00623 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.87□□□□□ -0.03
Apoa1Q00623 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.87□□□□□ -0.03
Apoa1Q00623 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.87□□□□□ -0.03
Apoa1Q00623 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.87□□□□□ -0.03
Apoa1Q00623 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Apoa1Q00623 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Apoa1Q00623 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Apoa1Q00623 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.87□□□□□ -0.03
Apoa1Q00623 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.86□□□□□ -0.03
Apoa1Q00623 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Apoa1Q00623 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Apoa1Q00623 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Apoa1Q00623 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Apoa1Q00623 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Apoa1Q00623 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Apoa1Q00623 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Apoa1Q00623 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Apoa1Q00623 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Apoa1Q00623 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.86□□□□□ -0.03
Apoa1Q00623 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.86□□□□□ -0.03
Apoa1Q00623 Gm27011-201ENSMUST00000182352 972 ntBASIC14.86□□□□□ -0.03
Apoa1Q00623 Gm37055-201ENSMUST00000191866 133 ntBASIC14.86□□□□□ -0.03
Apoa1Q00623 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.86□□□□□ -0.03
Apoa1Q00623 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.86□□□□□ -0.03
Apoa1Q00623 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Apoa1Q00623 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Apoa1Q00623 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Apoa1Q00623 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms