Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lhx1P63006 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lhx1P63006 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lhx1P63006 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lhx1P63006 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lhx1P63006 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lhx1P63006 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Lhx1P63006 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lhx1P63006 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lhx1P63006 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.41■□□□□ 0.06
Lhx1P63006 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lhx1P63006 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lhx1P63006 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.41■□□□□ 0.06
Lhx1P63006 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.4■□□□□ 0.06
Lhx1P63006 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.4■□□□□ 0.06
Lhx1P63006 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.4■□□□□ 0.06
Lhx1P63006 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.4■□□□□ 0.06
Lhx1P63006 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.4■□□□□ 0.06
Lhx1P63006 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Lhx1P63006 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.39■□□□□ 0.05
Lhx1P63006 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.39■□□□□ 0.05
Lhx1P63006 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.39■□□□□ 0.05
Lhx1P63006 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Lhx1P63006 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.39■□□□□ 0.05
Lhx1P63006 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Lhx1P63006 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Lhx1P63006 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Lhx1P63006 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Lhx1P63006 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Lhx1P63006 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.38■□□□□ 0.05
Lhx1P63006 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.38■□□□□ 0.05
Lhx1P63006 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.38■□□□□ 0.05
Lhx1P63006 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Gm5682-201ENSMUST00000173402 505 ntBASIC15.38■□□□□ 0.05
Lhx1P63006 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.38■□□□□ 0.05
Lhx1P63006 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.38■□□□□ 0.05
Lhx1P63006 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.38■□□□□ 0.05
Lhx1P63006 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Lhx1P63006 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Lhx1P63006 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Lhx1P63006 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Lhx1P63006 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.37■□□□□ 0.05
Lhx1P63006 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 Gm27628-201ENSMUST00000184911 107 ntBASIC15.37■□□□□ 0.05
Lhx1P63006 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.37■□□□□ 0.05
Lhx1P63006 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.37■□□□□ 0.05
Lhx1P63006 AW822252-206ENSMUST00000208904 237 ntBASIC15.37■□□□□ 0.05
Lhx1P63006 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.37■□□□□ 0.05
Lhx1P63006 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Lhx1P63006 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms