Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pfn1P62962 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.23□□□□□ -0.45
Pfn1P62962 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.23□□□□□ -0.45
Pfn1P62962 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pfn1P62962 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pfn1P62962 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Pfn1P62962 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pfn1P62962 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.22□□□□□ -0.45
Pfn1P62962 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pfn1P62962 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.22□□□□□ -0.45
Pfn1P62962 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Pfn1P62962 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Pfn1P62962 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC12.22□□□□□ -0.45
Pfn1P62962 Gm7638-201ENSMUST00000121348 967 ntBASIC12.22□□□□□ -0.45
Pfn1P62962 Gm12441-201ENSMUST00000121806 588 ntBASIC12.22□□□□□ -0.45
Pfn1P62962 Gm15378-201ENSMUST00000121894 207 ntBASIC12.22□□□□□ -0.45
Pfn1P62962 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.22□□□□□ -0.45
Pfn1P62962 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.22□□□□□ -0.45
Pfn1P62962 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Pfn1P62962 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pfn1P62962 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.22□□□□□ -0.45
Pfn1P62962 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.22□□□□□ -0.45
Pfn1P62962 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pfn1P62962 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pfn1P62962 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Pfn1P62962 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.21□□□□□ -0.45
Pfn1P62962 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.21□□□□□ -0.45
Pfn1P62962 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Trmt13-210ENSMUST00000198454 880 ntBASIC12.21□□□□□ -0.45
Pfn1P62962 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pfn1P62962 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pfn1P62962 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.21□□□□□ -0.46
Pfn1P62962 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms