Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm26308-201ENSMUST00000157768 69 ntBASIC12.67□□□□□ -0.38
Lmo4P61969 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.67□□□□□ -0.38
Lmo4P61969 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lmo4P61969 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Lmo4P61969 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lmo4P61969 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Lmo4P61969 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lmo4P61969 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Lmo4P61969 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lmo4P61969 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lmo4P61969 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Lmo4P61969 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.66□□□□□ -0.38
Lmo4P61969 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Lmo4P61969 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.66□□□□□ -0.38
Lmo4P61969 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.66□□□□□ -0.38
Lmo4P61969 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.66□□□□□ -0.38
Lmo4P61969 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.66□□□□□ -0.38
Lmo4P61969 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.66□□□□□ -0.38
Lmo4P61969 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Lmo4P61969 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lmo4P61969 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.65□□□□□ -0.38
Lmo4P61969 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Gm14722-201ENSMUST00000118943 689 ntBASIC12.65□□□□□ -0.38
Lmo4P61969 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.65□□□□□ -0.38
Lmo4P61969 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Lmo4P61969 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.65□□□□□ -0.38
Lmo4P61969 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.65□□□□□ -0.38
Lmo4P61969 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.65□□□□□ -0.38
Lmo4P61969 Chchd1-203ENSMUST00000224633 557 ntBASIC12.65□□□□□ -0.38
Lmo4P61969 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lmo4P61969 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lmo4P61969 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lmo4P61969 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lmo4P61969 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lmo4P61969 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.65□□□□□ -0.39
Lmo4P61969 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lmo4P61969 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.64□□□□□ -0.39
Lmo4P61969 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lmo4P61969 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Lmo4P61969 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lmo4P61969 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.64□□□□□ -0.39
Lmo4P61969 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.64□□□□□ -0.39
Lmo4P61969 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.64□□□□□ -0.39
Lmo4P61969 Gm18246-201ENSMUST00000221023 728 ntBASIC12.64□□□□□ -0.39
Lmo4P61969 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmo4P61969 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms