Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nphp4P59240 Gm14701-201ENSMUST00000117156 348 ntBASIC21.13■□□□□ 0.97
Nphp4P59240 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC21.13■□□□□ 0.97
Nphp4P59240 Gm44335-201ENSMUST00000196879 141 ntBASIC21.13■□□□□ 0.97
Nphp4P59240 Gm44297-201ENSMUST00000198304 141 ntBASIC21.13■□□□□ 0.97
Nphp4P59240 Gm44346-201ENSMUST00000198851 141 ntBASIC21.13■□□□□ 0.97
Nphp4P59240 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC21.13■□□□□ 0.97
Nphp4P59240 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC21.13■□□□□ 0.97
Nphp4P59240 CT025555.1-201ENSMUST00000225901 1217 ntBASIC21.13■□□□□ 0.97
Nphp4P59240 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nphp4P59240 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Nphp4P59240 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nphp4P59240 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC21.13■□□□□ 0.97
Nphp4P59240 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC21.13■□□□□ 0.97
Nphp4P59240 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nphp4P59240 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nphp4P59240 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nphp4P59240 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Nphp4P59240 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Nphp4P59240 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Nphp4P59240 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC21.12■□□□□ 0.97
Nphp4P59240 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Nphp4P59240 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Nphp4P59240 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Nphp4P59240 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC21.12■□□□□ 0.97
Nphp4P59240 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC21.12■□□□□ 0.97
Nphp4P59240 Mir6990-201ENSMUST00000183724 91 ntBASIC21.12■□□□□ 0.97
Nphp4P59240 Gpr146-202ENSMUST00000053120 1040 ntBASIC21.12■□□□□ 0.97
Nphp4P59240 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
Nphp4P59240 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Nphp4P59240 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Nphp4P59240 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Gm13410-201ENSMUST00000117058 1415 ntBASIC21.11■□□□□ 0.97
Nphp4P59240 Gm43548-201ENSMUST00000197139 2353 ntBASIC21.11■□□□□ 0.97
Nphp4P59240 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Nphp4P59240 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC21.11■□□□□ 0.97
Nphp4P59240 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC21.11■□□□□ 0.97
Nphp4P59240 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Nphp4P59240 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Nphp4P59240 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nphp4P59240 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Nphp4P59240 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Nphp4P59240 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC21.1■□□□□ 0.97
Nphp4P59240 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC21.1■□□□□ 0.97
Nphp4P59240 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC21.1■□□□□ 0.97
Nphp4P59240 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC21.1■□□□□ 0.97
Nphp4P59240 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC21.1■□□□□ 0.97
Nphp4P59240 Gm10154-201ENSMUST00000084445 354 ntBASIC21.1■□□□□ 0.97
Nphp4P59240 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Nphp4P59240 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nphp4P59240 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Nphp4P59240 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Nphp4P59240 Rprl2-201ENSMUST00000157150 290 ntBASIC21.09■□□□□ 0.97
Nphp4P59240 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms