Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup43P59235 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup43P59235 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Nup43P59235 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Nup43P59235 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Nup43P59235 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Nup43P59235 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.83□□□□□ -0.04
Nup43P59235 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Nup43P59235 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Nup43P59235 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Nup43P59235 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.83□□□□□ -0.04
Nup43P59235 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Nup43P59235 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nup43P59235 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.82□□□□□ -0.04
Nup43P59235 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.82□□□□□ -0.04
Nup43P59235 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.82□□□□□ -0.04
Nup43P59235 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.82□□□□□ -0.04
Nup43P59235 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.82□□□□□ -0.04
Nup43P59235 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.82□□□□□ -0.04
Nup43P59235 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.82□□□□□ -0.04
Nup43P59235 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Nup43P59235 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Nup43P59235 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Nup43P59235 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Nup43P59235 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.81□□□□□ -0.04
Nup43P59235 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Nup43P59235 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Nup43P59235 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.81□□□□□ -0.04
Nup43P59235 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.81□□□□□ -0.04
Nup43P59235 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nup43P59235 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Nup43P59235 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.8□□□□□ -0.04
Nup43P59235 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.8□□□□□ -0.04
Nup43P59235 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.8□□□□□ -0.04
Nup43P59235 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.8□□□□□ -0.04
Nup43P59235 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Nup43P59235 Gm44357-201ENSMUST00000195897 142 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Gm19658-201ENSMUST00000196231 138 ntBASIC14.8□□□□□ -0.04
Nup43P59235 Gm44367-201ENSMUST00000196836 138 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms