Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nub1P54729 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.9■□□□□ 0.3
Nub1P54729 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Nub1P54729 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.9■□□□□ 0.3
Nub1P54729 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.9■□□□□ 0.3
Nub1P54729 Gm9172-201ENSMUST00000212092 954 ntBASIC16.9■□□□□ 0.3
Nub1P54729 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.9■□□□□ 0.3
Nub1P54729 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.9■□□□□ 0.3
Nub1P54729 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nub1P54729 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nub1P54729 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nub1P54729 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nub1P54729 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nub1P54729 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nub1P54729 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nub1P54729 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nub1P54729 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nub1P54729 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Nub1P54729 Gm6257-201ENSMUST00000163864 910 ntBASIC16.89■□□□□ 0.29
Nub1P54729 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.89■□□□□ 0.29
Nub1P54729 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.89■□□□□ 0.29
Nub1P54729 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Nub1P54729 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Nub1P54729 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nub1P54729 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nub1P54729 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nub1P54729 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nub1P54729 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
Nub1P54729 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.88■□□□□ 0.29
Nub1P54729 Gm24589-201ENSMUST00000116692 94 ntBASIC16.88■□□□□ 0.29
Nub1P54729 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.88■□□□□ 0.29
Nub1P54729 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Nub1P54729 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.88■□□□□ 0.29
Nub1P54729 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nub1P54729 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Nub1P54729 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nub1P54729 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Nub1P54729 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nub1P54729 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nub1P54729 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
Nub1P54729 Gm4459-201ENSMUST00000118750 468 ntBASIC16.87■□□□□ 0.29
Nub1P54729 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.87■□□□□ 0.29
Nub1P54729 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.87■□□□□ 0.29
Nub1P54729 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.87■□□□□ 0.29
Nub1P54729 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nub1P54729 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms