Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Sox3P53784 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Sox3P53784 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sox3P53784 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sox3P53784 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sox3P53784 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.04■□□□□ -0
Sox3P53784 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sox3P53784 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sox3P53784 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sox3P53784 Phf7-203ENSMUST00000226565 1971 ntBASIC15.04■□□□□ -0
Sox3P53784 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sox3P53784 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.03■□□□□ -0
Sox3P53784 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.03■□□□□ -0
Sox3P53784 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sox3P53784 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sox3P53784 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sox3P53784 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.03■□□□□ -0
Sox3P53784 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.03■□□□□ -0
Sox3P53784 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.03■□□□□ -0
Sox3P53784 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.03■□□□□ -0
Sox3P53784 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.03■□□□□ -0
Sox3P53784 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
Sox3P53784 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.03■□□□□ -0
Sox3P53784 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.03■□□□□ -0
Sox3P53784 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
Sox3P53784 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sox3P53784 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sox3P53784 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.03■□□□□ -0
Sox3P53784 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.03■□□□□ -0
Sox3P53784 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC15.03■□□□□ -0
Sox3P53784 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sox3P53784 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Sox3P53784 Zkscan3-208ENSMUST00000224820 5398 ntBASIC15.02■□□□□ -0
Sox3P53784 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.02■□□□□ -0
Sox3P53784 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.02■□□□□ -0
Sox3P53784 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.02■□□□□ -0
Sox3P53784 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Sox3P53784 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Sox3P53784 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Gm6089-201ENSMUST00000197666 938 ntBASIC15.02■□□□□ -0
Sox3P53784 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.02■□□□□ -0
Sox3P53784 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 Gm10175-201ENSMUST00000086013 645 ntBASIC15.02■□□□□ -0
Sox3P53784 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sox3P53784 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox3P53784 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sox3P53784 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sox3P53784 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sox3P53784 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox3P53784 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Sox3P53784 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.02□□□□□ -0.01
Sox3P53784 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox3P53784 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox3P53784 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sox3P53784 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms