Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
GdnfP48540 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
GdnfP48540 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
GdnfP48540 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
GdnfP48540 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
GdnfP48540 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.79□□□□□ -0.2
GdnfP48540 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.79□□□□□ -0.2
GdnfP48540 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GdnfP48540 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
GdnfP48540 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
GdnfP48540 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GdnfP48540 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
GdnfP48540 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
GdnfP48540 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
GdnfP48540 Gm21559-201ENSMUST00000220638 855 ntBASIC13.78□□□□□ -0.2
GdnfP48540 AC121577.1-201ENSMUST00000227302 707 ntBASIC13.78□□□□□ -0.2
GdnfP48540 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Gm8587-201ENSMUST00000076538 843 ntBASIC13.78□□□□□ -0.2
GdnfP48540 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.78□□□□□ -0.2
GdnfP48540 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
GdnfP48540 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
GdnfP48540 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
GdnfP48540 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
GdnfP48540 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.77□□□□□ -0.21
GdnfP48540 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
GdnfP48540 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.77□□□□□ -0.21
GdnfP48540 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
GdnfP48540 Gm13836-201ENSMUST00000121159 501 ntBASIC13.77□□□□□ -0.21
GdnfP48540 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
GdnfP48540 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
GdnfP48540 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.77□□□□□ -0.21
GdnfP48540 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.77□□□□□ -0.21
GdnfP48540 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
GdnfP48540 Gm18101-201ENSMUST00000215769 548 ntBASIC13.77□□□□□ -0.21
GdnfP48540 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
GdnfP48540 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
GdnfP48540 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GdnfP48540 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
GdnfP48540 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GdnfP48540 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
GdnfP48540 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.76□□□□□ -0.21
GdnfP48540 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GdnfP48540 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.76□□□□□ -0.21
GdnfP48540 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GdnfP48540 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GdnfP48540 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GdnfP48540 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GdnfP48540 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms