Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.87□□□□□ -0.03
Cdx2P43241 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx2P43241 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx2P43241 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx2P43241 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cdx2P43241 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx2P43241 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx2P43241 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx2P43241 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx2P43241 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx2P43241 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx2P43241 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx2P43241 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx2P43241 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx2P43241 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx2P43241 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cdx2P43241 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Cdx2P43241 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.86□□□□□ -0.03
Cdx2P43241 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.86□□□□□ -0.03
Cdx2P43241 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx2P43241 Gm18889-201ENSMUST00000174284 929 ntBASIC14.86□□□□□ -0.03
Cdx2P43241 Gm25948-201ENSMUST00000175334 112 ntBASIC14.86□□□□□ -0.03
Cdx2P43241 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.86□□□□□ -0.03
Cdx2P43241 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.86□□□□□ -0.03
Cdx2P43241 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdx2P43241 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.86□□□□□ -0.03
Cdx2P43241 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.86□□□□□ -0.03
Cdx2P43241 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.86□□□□□ -0.03
Cdx2P43241 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.86□□□□□ -0.03
Cdx2P43241 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Cdx2P43241 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx2P43241 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx2P43241 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx2P43241 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Cdx2P43241 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Cdx2P43241 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Cdx2P43241 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Cdx2P43241 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdx2P43241 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.85□□□□□ -0.03
Cdx2P43241 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.85□□□□□ -0.03
Cdx2P43241 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.85□□□□□ -0.03
Cdx2P43241 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.85□□□□□ -0.03
Cdx2P43241 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Cdx2P43241 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdx2P43241 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdx2P43241 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.85□□□□□ -0.03
Cdx2P43241 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.85□□□□□ -0.03
Cdx2P43241 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Cdx2P43241 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.85□□□□□ -0.03
Cdx2P43241 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx2P43241 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.84□□□□□ -0.03
Cdx2P43241 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.84□□□□□ -0.03
Cdx2P43241 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.84□□□□□ -0.03
Cdx2P43241 Gm43125-201ENSMUST00000201724 730 ntBASIC14.84□□□□□ -0.03
Cdx2P43241 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdx2P43241 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdx2P43241 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx2P43241 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx2P43241 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx2P43241 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx2P43241 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx2P43241 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx2P43241 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx2P43241 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx2P43241 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx2P43241 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.83□□□□□ -0.03
Cdx2P43241 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx2P43241 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx2P43241 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms