Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.79□□□□□ -0.04
Sox6P40645 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sox6P40645 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sox6P40645 Gm29707-201ENSMUST00000196325 491 ntBASIC14.79□□□□□ -0.04
Sox6P40645 Gm18421-201ENSMUST00000204122 625 ntBASIC14.79□□□□□ -0.04
Sox6P40645 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox6P40645 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.79□□□□□ -0.04
Sox6P40645 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sox6P40645 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sox6P40645 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox6P40645 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sox6P40645 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sox6P40645 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sox6P40645 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.78□□□□□ -0.04
Sox6P40645 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Sox6P40645 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sox6P40645 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Sox6P40645 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.77□□□□□ -0.04
Sox6P40645 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox6P40645 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox6P40645 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox6P40645 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox6P40645 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox6P40645 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox6P40645 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.77□□□□□ -0.04
Sox6P40645 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sox6P40645 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox6P40645 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sox6P40645 Gm7977-201ENSMUST00000193787 748 ntBASIC14.77□□□□□ -0.05
Sox6P40645 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox6P40645 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox6P40645 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox6P40645 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox6P40645 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox6P40645 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.77□□□□□ -0.05
Sox6P40645 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox6P40645 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sox6P40645 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sox6P40645 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Sox6P40645 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Sox6P40645 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sox6P40645 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Sox6P40645 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox6P40645 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Sox6P40645 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.76□□□□□ -0.05
Sox6P40645 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Sox6P40645 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.76□□□□□ -0.05
Sox6P40645 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Sox6P40645 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Sox6P40645 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Sox6P40645 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Sox6P40645 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
Sox6P40645 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Sox6P40645 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Sox6P40645 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.75□□□□□ -0.05
Sox6P40645 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms