Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Sox5P35710 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox5P35710 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sox5P35710 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox5P35710 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox5P35710 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sox5P35710 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Gm6433-201ENSMUST00000118634 875 ntBASIC17.16■□□□□ 0.34
Sox5P35710 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sox5P35710 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.16■□□□□ 0.34
Sox5P35710 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Gm9987-201ENSMUST00000069768 567 ntBASIC17.16■□□□□ 0.34
Sox5P35710 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sox5P35710 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Sox5P35710 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sox5P35710 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sox5P35710 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sox5P35710 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.15■□□□□ 0.34
Sox5P35710 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Gm7669-201ENSMUST00000210184 1603 ntBASIC17.15■□□□□ 0.34
Sox5P35710 Sybu-209ENSMUST00000228639 4113 ntBASIC17.15■□□□□ 0.34
Sox5P35710 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.15■□□□□ 0.34
Sox5P35710 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sox5P35710 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.15■□□□□ 0.34
Sox5P35710 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sox5P35710 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sox5P35710 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Sox5P35710 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sox5P35710 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Sox5P35710 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Sox5P35710 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Sox5P35710 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sox5P35710 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.14■□□□□ 0.33
Sox5P35710 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.14■□□□□ 0.33
Sox5P35710 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.14■□□□□ 0.33
Sox5P35710 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.14■□□□□ 0.33
Sox5P35710 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Sox5P35710 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sox5P35710 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Sox5P35710 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.13■□□□□ 0.33
Sox5P35710 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sox5P35710 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.13■□□□□ 0.33
Sox5P35710 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sox5P35710 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sox5P35710 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sox5P35710 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms