Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.53□□□□□ -0.08
Foxa1P35582 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Foxa1P35582 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.53□□□□□ -0.08
Foxa1P35582 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Gm18622-201ENSMUST00000219361 595 ntBASIC14.53□□□□□ -0.08
Foxa1P35582 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.53□□□□□ -0.08
Foxa1P35582 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxa1P35582 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxa1P35582 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxa1P35582 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxa1P35582 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxa1P35582 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Foxa1P35582 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Foxa1P35582 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
Foxa1P35582 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC14.52□□□□□ -0.08
Foxa1P35582 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Foxa1P35582 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.52□□□□□ -0.09
Foxa1P35582 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxa1P35582 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Foxa1P35582 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC14.52□□□□□ -0.09
Foxa1P35582 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.52□□□□□ -0.09
Foxa1P35582 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.52□□□□□ -0.09
Foxa1P35582 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Foxa1P35582 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxa1P35582 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxa1P35582 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxa1P35582 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxa1P35582 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Foxa1P35582 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Foxa1P35582 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC14.51□□□□□ -0.09
Foxa1P35582 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.51□□□□□ -0.09
Foxa1P35582 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.51□□□□□ -0.09
Foxa1P35582 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Foxa1P35582 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Foxa1P35582 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Foxa1P35582 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Foxa1P35582 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.51□□□□□ -0.09
Foxa1P35582 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Foxa1P35582 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Foxa1P35582 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Foxa1P35582 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.5□□□□□ -0.09
Foxa1P35582 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.5□□□□□ -0.09
Foxa1P35582 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Foxa1P35582 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.5□□□□□ -0.09
Foxa1P35582 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.5□□□□□ -0.09
Foxa1P35582 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.5□□□□□ -0.09
Foxa1P35582 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.5□□□□□ -0.09
Foxa1P35582 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.5□□□□□ -0.09
Foxa1P35582 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Foxa1P35582 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms