Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Gm6376-201ENSMUST00000209407 580 ntBASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf1bP25119 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Rps4l-201ENSMUST00000071745 943 ntBASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf1bP25119 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Gm4535-201ENSMUST00000182274 558 ntBASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Gm6296-201ENSMUST00000222599 943 ntBASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Gm10355-201ENSMUST00000097146 517 ntBASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf1bP25119 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.52□□□□□ -0.08
Tnfrsf1bP25119 Gm13884-201ENSMUST00000118103 829 ntBASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.52□□□□□ -0.09
Tnfrsf1bP25119 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1bP25119 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1bP25119 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1bP25119 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1bP25119 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1bP25119 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tnfrsf1bP25119 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms