Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cxcl1P12850 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cxcl1P12850 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl1P12850 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl1P12850 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl1P12850 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl1P12850 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl1P12850 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.02□□□□□ -0.32
Cxcl1P12850 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Cxcl1P12850 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl1P12850 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl1P12850 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.02□□□□□ -0.32
Cxcl1P12850 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl1P12850 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cxcl1P12850 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC13.02□□□□□ -0.33
Cxcl1P12850 Gm22240-201ENSMUST00000175225 82 ntBASIC13.02□□□□□ -0.33
Cxcl1P12850 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.02□□□□□ -0.33
Cxcl1P12850 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.02□□□□□ -0.33
Cxcl1P12850 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.02□□□□□ -0.33
Cxcl1P12850 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.02□□□□□ -0.33
Cxcl1P12850 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.02□□□□□ -0.33
Cxcl1P12850 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.02□□□□□ -0.33
Cxcl1P12850 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cxcl1P12850 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.02□□□□□ -0.33
Cxcl1P12850 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Cxcl1P12850 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cxcl1P12850 Gm27011-201ENSMUST00000182352 972 ntBASIC13.01□□□□□ -0.33
Cxcl1P12850 Gm37722-201ENSMUST00000193757 208 ntBASIC13.01□□□□□ -0.33
Cxcl1P12850 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
Cxcl1P12850 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cxcl1P12850 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cxcl1P12850 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cxcl1P12850 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.01□□□□□ -0.33
Cxcl1P12850 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Cxcl1P12850 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cxcl1P12850 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cxcl1P12850 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
Cxcl1P12850 Gm11839-201ENSMUST00000120647 1953 ntBASIC13□□□□□ -0.33
Cxcl1P12850 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Cxcl1P12850 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Gm13559-201ENSMUST00000120476 863 ntBASIC13□□□□□ -0.33
Cxcl1P12850 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13□□□□□ -0.33
Cxcl1P12850 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13□□□□□ -0.33
Cxcl1P12850 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Gm9484-201ENSMUST00000195892 1159 ntBASIC13□□□□□ -0.33
Cxcl1P12850 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13□□□□□ -0.33
Cxcl1P12850 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cxcl1P12850 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms