Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.2□□□□□ -0.14
Ctla2aP12399 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ctla2aP12399 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.2□□□□□ -0.14
Ctla2aP12399 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.2□□□□□ -0.14
Ctla2aP12399 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.2□□□□□ -0.14
Ctla2aP12399 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
Ctla2aP12399 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ctla2aP12399 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ctla2aP12399 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Ctla2aP12399 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.19□□□□□ -0.14
Ctla2aP12399 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Il3ra-202ENSMUST00000223589 738 ntBASIC14.19□□□□□ -0.14
Ctla2aP12399 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.19□□□□□ -0.14
Ctla2aP12399 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctla2aP12399 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.19□□□□□ -0.14
Ctla2aP12399 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.19□□□□□ -0.14
Ctla2aP12399 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.19□□□□□ -0.14
Ctla2aP12399 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ctla2aP12399 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.19□□□□□ -0.14
Ctla2aP12399 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.18□□□□□ -0.14
Ctla2aP12399 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.18□□□□□ -0.14
Ctla2aP12399 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.18□□□□□ -0.14
Ctla2aP12399 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.18□□□□□ -0.14
Ctla2aP12399 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.18□□□□□ -0.14
Ctla2aP12399 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.18□□□□□ -0.14
Ctla2aP12399 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ctla2aP12399 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ctla2aP12399 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Ctla2aP12399 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ctla2aP12399 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.18□□□□□ -0.14
Ctla2aP12399 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ctla2aP12399 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctla2aP12399 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctla2aP12399 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Ctla2aP12399 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.17□□□□□ -0.14
Ctla2aP12399 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctla2aP12399 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctla2aP12399 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctla2aP12399 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Ctla2aP12399 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctla2aP12399 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctla2aP12399 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctla2aP12399 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC14.17□□□□□ -0.14
Ctla2aP12399 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.17□□□□□ -0.14
Ctla2aP12399 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ctla2aP12399 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ctla2aP12399 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms