Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hoxc6P10629 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Hoxc6P10629 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.37■□□□□ 0.37
Hoxc6P10629 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.37■□□□□ 0.37
Hoxc6P10629 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.37■□□□□ 0.37
Hoxc6P10629 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.37■□□□□ 0.37
Hoxc6P10629 Rpph1-201ENSMUST00000175096 319 ntBASIC17.37■□□□□ 0.37
Hoxc6P10629 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Gm20949-201ENSMUST00000206478 952 ntBASIC17.37■□□□□ 0.37
Hoxc6P10629 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Gm13127-201ENSMUST00000118978 1389 ntBASIC17.37■□□□□ 0.37
Hoxc6P10629 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Hoxc6P10629 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hoxc6P10629 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc6P10629 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hoxc6P10629 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc6P10629 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc6P10629 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hoxc6P10629 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hoxc6P10629 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.36■□□□□ 0.37
Hoxc6P10629 Gm5186-201ENSMUST00000218781 920 ntBASIC17.36■□□□□ 0.37
Hoxc6P10629 Gpr146-202ENSMUST00000053120 1040 ntBASIC17.36■□□□□ 0.37
Hoxc6P10629 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc6P10629 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Hoxc6P10629 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc6P10629 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.36■□□□□ 0.37
Hoxc6P10629 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc6P10629 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc6P10629 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc6P10629 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hoxc6P10629 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.36■□□□□ 0.37
Hoxc6P10629 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.35■□□□□ 0.37
Hoxc6P10629 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Hoxc6P10629 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hoxc6P10629 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Hoxc6P10629 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.35■□□□□ 0.37
Hoxc6P10629 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Hoxc6P10629 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hoxc6P10629 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC17.34■□□□□ 0.37
Hoxc6P10629 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Gm25948-201ENSMUST00000175334 112 ntBASIC17.34■□□□□ 0.37
Hoxc6P10629 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hoxc6P10629 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.34■□□□□ 0.37
Hoxc6P10629 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hoxc6P10629 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc6P10629 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Hoxc6P10629 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms