Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.12■□□□□ 0.17
Syn1O88935 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.12■□□□□ 0.17
Syn1O88935 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.12■□□□□ 0.17
Syn1O88935 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Syn1O88935 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.12■□□□□ 0.17
Syn1O88935 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Syn1O88935 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Syn1O88935 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Syn1O88935 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Syn1O88935 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Syn1O88935 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Gm15358-201ENSMUST00000119249 520 ntBASIC16.11■□□□□ 0.17
Syn1O88935 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Gm18489-201ENSMUST00000172565 551 ntBASIC16.11■□□□□ 0.17
Syn1O88935 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Syn1O88935 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Syn1O88935 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC16.11■□□□□ 0.17
Syn1O88935 Thap2-203ENSMUST00000218989 527 ntBASIC16.11■□□□□ 0.17
Syn1O88935 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.11■□□□□ 0.17
Syn1O88935 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.11■□□□□ 0.17
Syn1O88935 Gm15222-202ENSMUST00000228667 1726 ntBASIC16.11■□□□□ 0.17
Syn1O88935 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Syn1O88935 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Syn1O88935 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Syn1O88935 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Syn1O88935 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Syn1O88935 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.1■□□□□ 0.17
Syn1O88935 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.1■□□□□ 0.17
Syn1O88935 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.1■□□□□ 0.17
Syn1O88935 Gm5779-201ENSMUST00000218467 910 ntBASIC16.1■□□□□ 0.17
Syn1O88935 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Syn1O88935 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Syn1O88935 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.1■□□□□ 0.17
Syn1O88935 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Syn1O88935 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Syn1O88935 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Syn1O88935 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Syn1O88935 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Syn1O88935 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Syn1O88935 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Syn1O88935 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Syn1O88935 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Syn1O88935 Gm22065-201ENSMUST00000103753 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm22066-201ENSMUST00000103761 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm24932-201ENSMUST00000103763 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm24115-201ENSMUST00000103799 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm22190-201ENSMUST00000103827 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm22191-201ENSMUST00000103831 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm24721-201ENSMUST00000103849 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm28018-201ENSMUST00000103869 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm26399-201ENSMUST00000103937 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Syn1O88935 Gm25349-201ENSMUST00000177728 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm23616-201ENSMUST00000177797 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm25871-201ENSMUST00000177816 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm24752-201ENSMUST00000178240 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm24496-201ENSMUST00000178287 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm25649-201ENSMUST00000178476 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm25548-201ENSMUST00000178681 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm23147-201ENSMUST00000178841 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm26095-201ENSMUST00000179270 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm22171-201ENSMUST00000179283 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm23936-201ENSMUST00000179354 110 ntBASIC16.09■□□□□ 0.17
Syn1O88935 Gm22619-201ENSMUST00000179516 110 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms