Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.07■□□□□ 0
Hcn1O88704 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.07■□□□□ 0
Hcn1O88704 Gm44430-201ENSMUST00000203376 995 ntBASIC15.07■□□□□ 0
Hcn1O88704 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.07■□□□□ 0
Hcn1O88704 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.06■□□□□ 0
Hcn1O88704 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hcn1O88704 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Hcn1O88704 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.06■□□□□ 0
Hcn1O88704 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Hcn1O88704 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Hcn1O88704 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Hcn1O88704 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hcn1O88704 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.06■□□□□ 0
Hcn1O88704 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.06■□□□□ 0
Hcn1O88704 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.06■□□□□ 0
Hcn1O88704 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Hcn1O88704 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Hcn1O88704 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.06■□□□□ 0
Hcn1O88704 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Hcn1O88704 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.06■□□□□ 0
Hcn1O88704 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hcn1O88704 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Hcn1O88704 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Hcn1O88704 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Hcn1O88704 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.05■□□□□ 0
Hcn1O88704 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Hcn1O88704 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Hcn1O88704 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.05■□□□□ -0
Hcn1O88704 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Hcn1O88704 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.05■□□□□ -0
Hcn1O88704 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.05■□□□□ -0
Hcn1O88704 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.05■□□□□ -0
Hcn1O88704 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Hcn1O88704 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Hcn1O88704 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.04■□□□□ -0
Hcn1O88704 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.04■□□□□ -0
Hcn1O88704 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
Hcn1O88704 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.04■□□□□ -0
Hcn1O88704 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.04■□□□□ -0
Hcn1O88704 Gm28033-201ENSMUST00000184224 96 ntBASIC15.04■□□□□ -0
Hcn1O88704 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Hcn1O88704 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Hcn1O88704 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms