Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.31■□□□□ 0.04
ClppO88696 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.31■□□□□ 0.04
ClppO88696 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.31■□□□□ 0.04
ClppO88696 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ClppO88696 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
ClppO88696 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ClppO88696 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ClppO88696 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ClppO88696 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Gm12497-201ENSMUST00000138778 237 ntBASIC15.3■□□□□ 0.04
ClppO88696 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Gm25745-201ENSMUST00000174945 133 ntBASIC15.3■□□□□ 0.04
ClppO88696 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ClppO88696 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ClppO88696 Gm10060-201ENSMUST00000212002 111 ntBASIC15.3■□□□□ 0.04
ClppO88696 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.3■□□□□ 0.04
ClppO88696 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.3■□□□□ 0.04
ClppO88696 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Rubie-203ENSMUST00000227803 2430 ntBASIC15.3■□□□□ 0.04
ClppO88696 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
ClppO88696 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ClppO88696 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
ClppO88696 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
ClppO88696 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.3■□□□□ 0.04
ClppO88696 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ClppO88696 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.29■□□□□ 0.04
ClppO88696 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ClppO88696 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.29■□□□□ 0.04
ClppO88696 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
ClppO88696 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ClppO88696 Gm44357-201ENSMUST00000195897 142 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.29■□□□□ 0.04
ClppO88696 Gm19658-201ENSMUST00000196231 138 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm44367-201ENSMUST00000196836 138 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm44350-201ENSMUST00000197197 138 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm44390-201ENSMUST00000197533 144 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm44313-201ENSMUST00000198018 138 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm44486-201ENSMUST00000198508 138 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm44314-201ENSMUST00000199263 138 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm44394-201ENSMUST00000199558 138 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm44484-201ENSMUST00000199873 138 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm44466-201ENSMUST00000200264 138 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm44359-201ENSMUST00000200671 138 ntBASIC15.29■□□□□ 0.04
ClppO88696 Gm9172-201ENSMUST00000212092 954 ntBASIC15.29■□□□□ 0.04
ClppO88696 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.29■□□□□ 0.04
ClppO88696 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
ClppO88696 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
ClppO88696 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.29■□□□□ 0.04
ClppO88696 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
ClppO88696 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.29■□□□□ 0.04
ClppO88696 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClppO88696 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClppO88696 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClppO88696 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClppO88696 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.28■□□□□ 0.04
ClppO88696 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClppO88696 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms