Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Slc6a20bO88575 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a20bO88575 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Slc6a20bO88575 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.08■□□□□ 0.32
Slc6a20bO88575 Gm12008-201ENSMUST00000117791 755 ntBASIC17.08■□□□□ 0.32
Slc6a20bO88575 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Slc6a20bO88575 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Gm13223-201ENSMUST00000118609 747 ntBASIC17.07■□□□□ 0.32
Slc6a20bO88575 Gm43767-201ENSMUST00000198933 381 ntBASIC17.07■□□□□ 0.32
Slc6a20bO88575 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.07■□□□□ 0.32
Slc6a20bO88575 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.07■□□□□ 0.32
Slc6a20bO88575 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.07■□□□□ 0.32
Slc6a20bO88575 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.07■□□□□ 0.32
Slc6a20bO88575 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Slc6a20bO88575 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc6a20bO88575 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a20bO88575 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a20bO88575 Gm25287-201ENSMUST00000103846 110 ntBASIC17.05■□□□□ 0.32
Slc6a20bO88575 Gm22918-201ENSMUST00000103855 110 ntBASIC17.05■□□□□ 0.32
Slc6a20bO88575 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms