Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.46□□□□□ -0.25
Cldn1O88551 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.46□□□□□ -0.25
Cldn1O88551 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.46□□□□□ -0.25
Cldn1O88551 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.46□□□□□ -0.25
Cldn1O88551 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cldn1O88551 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cldn1O88551 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cldn1O88551 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cldn1O88551 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cldn1O88551 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cldn1O88551 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cldn1O88551 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.45□□□□□ -0.26
Cldn1O88551 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.45□□□□□ -0.26
Cldn1O88551 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.45□□□□□ -0.26
Cldn1O88551 Gm27321-201ENSMUST00000185021 205 ntBASIC13.45□□□□□ -0.26
Cldn1O88551 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.45□□□□□ -0.26
Cldn1O88551 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.45□□□□□ -0.26
Cldn1O88551 Gm44872-201ENSMUST00000207864 420 ntBASIC13.45□□□□□ -0.26
Cldn1O88551 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.45□□□□□ -0.26
Cldn1O88551 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cldn1O88551 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.45□□□□□ -0.26
Cldn1O88551 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.45□□□□□ -0.26
Cldn1O88551 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Cldn1O88551 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cldn1O88551 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.44□□□□□ -0.26
Cldn1O88551 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.44□□□□□ -0.26
Cldn1O88551 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cldn1O88551 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.44□□□□□ -0.26
Cldn1O88551 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.44□□□□□ -0.26
Cldn1O88551 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Gm9172-201ENSMUST00000212092 954 ntBASIC13.44□□□□□ -0.26
Cldn1O88551 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.44□□□□□ -0.26
Cldn1O88551 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.44□□□□□ -0.26
Cldn1O88551 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.44□□□□□ -0.26
Cldn1O88551 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Cldn1O88551 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cldn1O88551 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.44□□□□□ -0.26
Cldn1O88551 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cldn1O88551 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Cldn1O88551 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cldn1O88551 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cldn1O88551 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.43□□□□□ -0.26
Cldn1O88551 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldn1O88551 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Cldn1O88551 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cldn1O88551 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldn1O88551 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.43□□□□□ -0.26
Cldn1O88551 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Cldn1O88551 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldn1O88551 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldn1O88551 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Cldn1O88551 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms