Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cops3O88543 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cops3O88543 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cops3O88543 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.1□□□□□ -0.15
Cops3O88543 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Cops3O88543 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cops3O88543 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.1□□□□□ -0.15
Cops3O88543 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cops3O88543 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.1□□□□□ -0.15
Cops3O88543 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.1□□□□□ -0.15
Cops3O88543 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.1□□□□□ -0.15
Cops3O88543 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.1□□□□□ -0.15
Cops3O88543 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Cops3O88543 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cops3O88543 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cops3O88543 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.09□□□□□ -0.15
Cops3O88543 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.09□□□□□ -0.15
Cops3O88543 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.09□□□□□ -0.15
Cops3O88543 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.09□□□□□ -0.15
Cops3O88543 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.09□□□□□ -0.15
Cops3O88543 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.09□□□□□ -0.15
Cops3O88543 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cops3O88543 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Cops3O88543 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cops3O88543 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.09□□□□□ -0.15
Cops3O88543 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Cops3O88543 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cops3O88543 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cops3O88543 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cops3O88543 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Cops3O88543 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.08□□□□□ -0.16
Cops3O88543 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.08□□□□□ -0.16
Cops3O88543 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.08□□□□□ -0.16
Cops3O88543 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cops3O88543 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.08□□□□□ -0.16
Cops3O88543 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.08□□□□□ -0.16
Cops3O88543 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.08□□□□□ -0.16
Cops3O88543 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Cops3O88543 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cops3O88543 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cops3O88543 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cops3O88543 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cops3O88543 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Cops3O88543 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms