Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Cacna1hO88427 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.21■□□□□ 0.03
Cacna1hO88427 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.21■□□□□ 0.03
Cacna1hO88427 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1hO88427 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1hO88427 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1hO88427 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.21■□□□□ 0.03
Cacna1hO88427 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1hO88427 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1hO88427 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1hO88427 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.21■□□□□ 0.03
Cacna1hO88427 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cacna1hO88427 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cacna1hO88427 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cacna1hO88427 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cacna1hO88427 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.21■□□□□ 0.03
Cacna1hO88427 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1hO88427 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.21■□□□□ 0.02
Cacna1hO88427 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cacna1hO88427 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna1hO88427 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna1hO88427 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna1hO88427 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.2■□□□□ 0.02
Cacna1hO88427 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC15.2■□□□□ 0.02
Cacna1hO88427 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Gm7775-201ENSMUST00000218871 853 ntBASIC15.2■□□□□ 0.02
Cacna1hO88427 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cacna1hO88427 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.2■□□□□ 0.02
Cacna1hO88427 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1hO88427 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cacna1hO88427 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC15.19■□□□□ 0.02
Cacna1hO88427 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cacna1hO88427 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.19■□□□□ 0.02
Cacna1hO88427 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Cacna1hO88427 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Cacna1hO88427 Gm11918-201ENSMUST00000121660 179 ntBASIC15.19■□□□□ 0.02
Cacna1hO88427 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Gm18827-201ENSMUST00000188341 790 ntBASIC15.19■□□□□ 0.02
Cacna1hO88427 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cacna1hO88427 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cacna1hO88427 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cacna1hO88427 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cacna1hO88427 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cacna1hO88427 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cacna1hO88427 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC15.18■□□□□ 0.02
Cacna1hO88427 Gm44344-201ENSMUST00000200287 129 ntBASIC15.18■□□□□ 0.02
Cacna1hO88427 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cacna1hO88427 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cacna1hO88427 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.18■□□□□ 0.02
Cacna1hO88427 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.18■□□□□ 0.02
Cacna1hO88427 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Cacna1hO88427 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cacna1hO88427 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.18■□□□□ 0.02
Cacna1hO88427 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cacna1hO88427 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cacna1hO88427 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms