Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC20.21■□□□□ 0.83
Ubr1O70481 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.21■□□□□ 0.83
Ubr1O70481 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ubr1O70481 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC20.21■□□□□ 0.83
Ubr1O70481 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC20.21■□□□□ 0.83
Ubr1O70481 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.21■□□□□ 0.83
Ubr1O70481 Gm18057-201ENSMUST00000208220 503 ntBASIC20.21■□□□□ 0.83
Ubr1O70481 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ubr1O70481 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Ubr1O70481 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr1O70481 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr1O70481 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr1O70481 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr1O70481 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr1O70481 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ubr1O70481 Gm42473-201ENSMUST00000201056 2291 ntBASIC20.2■□□□□ 0.82
Ubr1O70481 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ubr1O70481 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Ubr1O70481 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC20.19■□□□□ 0.82
Ubr1O70481 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC20.19■□□□□ 0.82
Ubr1O70481 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ubr1O70481 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
Ubr1O70481 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Ubr1O70481 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ubr1O70481 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.18■□□□□ 0.82
Ubr1O70481 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
Ubr1O70481 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ubr1O70481 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC20.18■□□□□ 0.82
Ubr1O70481 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Ubr1O70481 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Ubr1O70481 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC20.17■□□□□ 0.82
Ubr1O70481 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Ubr1O70481 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ubr1O70481 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC20.16■□□□□ 0.82
Ubr1O70481 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC20.16■□□□□ 0.82
Ubr1O70481 Gm22175-201ENSMUST00000175007 78 ntBASIC20.16■□□□□ 0.82
Ubr1O70481 Gm8597-201ENSMUST00000191525 1109 ntBASIC20.16■□□□□ 0.82
Ubr1O70481 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC20.16■□□□□ 0.82
Ubr1O70481 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ubr1O70481 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Ubr1O70481 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC20.15■□□□□ 0.82
Ubr1O70481 Gm13015-201ENSMUST00000118674 204 ntBASIC20.15■□□□□ 0.82
Ubr1O70481 Gm12428-201ENSMUST00000119844 727 ntBASIC20.15■□□□□ 0.82
Ubr1O70481 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Ubr1O70481 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms