Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Pde6dO55057 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Pde6dO55057 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pde6dO55057 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.42□□□□□ -0.42
Pde6dO55057 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.42□□□□□ -0.42
Pde6dO55057 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.42□□□□□ -0.42
Pde6dO55057 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.42□□□□□ -0.42
Pde6dO55057 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6dO55057 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.41□□□□□ -0.42
Pde6dO55057 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6dO55057 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pde6dO55057 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6dO55057 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Pde6dO55057 Gm13148-201ENSMUST00000118892 745 ntBASIC12.41□□□□□ -0.42
Pde6dO55057 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6dO55057 Gm12134-201ENSMUST00000122109 520 ntBASIC12.41□□□□□ -0.42
Pde6dO55057 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.41□□□□□ -0.42
Pde6dO55057 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.41□□□□□ -0.42
Pde6dO55057 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.41□□□□□ -0.42
Pde6dO55057 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pde6dO55057 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.41□□□□□ -0.42
Pde6dO55057 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Pde6dO55057 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Pde6dO55057 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.41□□□□□ -0.42
Pde6dO55057 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pde6dO55057 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.41□□□□□ -0.42
Pde6dO55057 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pde6dO55057 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.4□□□□□ -0.42
Pde6dO55057 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
Pde6dO55057 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 Gm11839-201ENSMUST00000120647 1953 ntBASIC12.4□□□□□ -0.42
Pde6dO55057 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pde6dO55057 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pde6dO55057 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms