Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.66□□□□□ -0.06
Abca4O35600 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Asic1-205ENSMUST00000228185 1818 ntBASIC14.66□□□□□ -0.06
Abca4O35600 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.66□□□□□ -0.06
Abca4O35600 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.65□□□□□ -0.06
Abca4O35600 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Gm4959-201ENSMUST00000197271 1044 ntBASIC14.65□□□□□ -0.06
Abca4O35600 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.65□□□□□ -0.06
Abca4O35600 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.65□□□□□ -0.06
Abca4O35600 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Abca4O35600 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Abca4O35600 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Abca4O35600 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Abca4O35600 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Abca4O35600 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.64□□□□□ -0.07
Abca4O35600 Gm12091-201ENSMUST00000146791 830 ntBASIC14.64□□□□□ -0.07
Abca4O35600 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.64□□□□□ -0.07
Abca4O35600 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Gm45841-201ENSMUST00000207700 164 ntBASIC14.64□□□□□ -0.07
Abca4O35600 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.64□□□□□ -0.07
Abca4O35600 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.64□□□□□ -0.07
Abca4O35600 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Abca4O35600 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.64□□□□□ -0.07
Abca4O35600 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.64□□□□□ -0.07
Abca4O35600 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC14.64□□□□□ -0.07
Abca4O35600 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Abca4O35600 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Abca4O35600 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.64□□□□□ -0.07
Abca4O35600 Gm18624-201ENSMUST00000220966 658 ntBASIC14.64□□□□□ -0.07
Abca4O35600 Shd-206ENSMUST00000225145 998 ntBASIC14.64□□□□□ -0.07
Abca4O35600 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.64□□□□□ -0.07
Abca4O35600 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Abca4O35600 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Abca4O35600 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.63□□□□□ -0.07
Abca4O35600 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Abca4O35600 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Abca4O35600 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.63□□□□□ -0.07
Abca4O35600 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
Abca4O35600 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Abca4O35600 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.63□□□□□ -0.07
Abca4O35600 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Abca4O35600 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
Abca4O35600 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Abca4O35600 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms