Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Efnb3O35393 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Efnb3O35393 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Efnb3O35393 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Efnb3O35393 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.45□□□□□ -0.42
Efnb3O35393 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.45□□□□□ -0.42
Efnb3O35393 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.45□□□□□ -0.42
Efnb3O35393 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Efnb3O35393 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.45□□□□□ -0.42
Efnb3O35393 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Efnb3O35393 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.44□□□□□ -0.42
Efnb3O35393 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.44□□□□□ -0.42
Efnb3O35393 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.44□□□□□ -0.42
Efnb3O35393 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Efnb3O35393 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.44□□□□□ -0.42
Efnb3O35393 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.44□□□□□ -0.42
Efnb3O35393 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Efnb3O35393 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.44□□□□□ -0.42
Efnb3O35393 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Efnb3O35393 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Efnb3O35393 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Efnb3O35393 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Efnb3O35393 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Gm11336-201ENSMUST00000118168 334 ntBASIC12.43□□□□□ -0.42
Efnb3O35393 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.43□□□□□ -0.42
Efnb3O35393 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.43□□□□□ -0.42
Efnb3O35393 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.43□□□□□ -0.42
Efnb3O35393 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.43□□□□□ -0.42
Efnb3O35393 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.43□□□□□ -0.42
Efnb3O35393 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Efnb3O35393 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Gm37912-201ENSMUST00000191895 3076 ntBASIC12.43□□□□□ -0.42
Efnb3O35393 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Efnb3O35393 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Efnb3O35393 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.42□□□□□ -0.42
Efnb3O35393 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Efnb3O35393 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.42□□□□□ -0.42
Efnb3O35393 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Efnb3O35393 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Efnb3O35393 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.42□□□□□ -0.42
Efnb3O35393 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.42□□□□□ -0.42
Efnb3O35393 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Efnb3O35393 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms