Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.69■□□□□ 0.58
Hdac1O09106 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.69■□□□□ 0.58
Hdac1O09106 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Hdac1O09106 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.69■□□□□ 0.58
Hdac1O09106 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.69■□□□□ 0.58
Hdac1O09106 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Hdac1O09106 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Hdac1O09106 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Hdac1O09106 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Hdac1O09106 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Hdac1O09106 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Hdac1O09106 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.68■□□□□ 0.58
Hdac1O09106 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.68■□□□□ 0.58
Hdac1O09106 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Gm15565-201ENSMUST00000118890 427 ntBASIC18.68■□□□□ 0.58
Hdac1O09106 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.68■□□□□ 0.58
Hdac1O09106 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Hdac1O09106 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.68■□□□□ 0.58
Hdac1O09106 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Hdac1O09106 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Hdac1O09106 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hdac1O09106 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hdac1O09106 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Hdac1O09106 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hdac1O09106 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Hdac1O09106 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Hdac1O09106 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Gm6433-201ENSMUST00000118634 875 ntBASIC18.66■□□□□ 0.58
Hdac1O09106 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.66■□□□□ 0.58
Hdac1O09106 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hdac1O09106 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hdac1O09106 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hdac1O09106 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Hdac1O09106 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Hdac1O09106 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
Hdac1O09106 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.65■□□□□ 0.58
Hdac1O09106 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Hdac1O09106 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.65■□□□□ 0.58
Hdac1O09106 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hdac1O09106 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hdac1O09106 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hdac1O09106 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.65■□□□□ 0.58
Hdac1O09106 Gm25406-201ENSMUST00000157599 105 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms